Esrf scientific software package

Please contact andre rossberg, if you wish to use this software. The gnxas package is a computer code for exafs data analysis based on multiplescattering ms calculations and a rigorous fitting procedure of the raw experimental data. The 2d phase maps retrieved from the angular projections were used as input for a tomographic reconstruction based on the filtered back projection algorithm method esrf pyhst software package. The last generation of synchrotron and the free electron lasers make possible the recording of data up to now unattainable. To install a package from the command line, use % sudo aptget install alternatively, you can. Monochromator, deflector, and diffractometer are controlled by the spec.

A software contract, which has to be signed before use, is here. All packages from the software repository are then available from e. Monochromator, deflector, and diffractometer are controlled by the spec software package from certified scientific software. The software orange, developed at the university of ljubljana slo, is the high level workflow engine that provides the interaction with the user and communication mechanisms. The european synchrotron, the esrf, is an international research centre based in grenoble, france. Manuel sanchez del rio esrf to design oasys orange synchrotron suite, a completely new graphical environment for modeling beamlines and. The functions are very wide, going from the development of longterm projects to daytoday consulting and troubleshooting. Riekel european synchrotron radiation facility, 6 rue jules horowitz, bp 220, 38043 grenoble, france the id beamline at the european synchrotron radiation facility specialises in.

Radia has been heavily benchmarked with a commercially available finite element package and with real devices built at the esrf. Apbs is a software package for the numerical solution of the poissonboltzmann equation pbe, one of the most popular continuum models for describing electrostatic interactions between molecular solutes in salty, aqueous media. Framework for scientific ptychography including suitable. The best way to open an esrf file is to simply doubleclick it and let the default assoisated application open the file. Compilation, parallelising andor distribution, maintenance, troubleshooting and upgrade of large. Integrate scientific modules in the online data processing workflow of esrf beamlines. Saxs program package european synchrotron radiation facility. Develop, maintain, find and improve data analysis programs and, more specifically, scientific software needed for data analysis at the esrf. A software with a graphical user interface has been developed with the aim of facilitating the data analysis for users of a new resonant inelastic xray scattering rixs spectrometer installed at the esrf beamline id32. Esrf is listed in the worlds largest and most authoritative dictionary database of abbreviations and acronyms the free dictionary. Whilst the list below is not comprehensive, it may help guide sas practitioners by sorting them according to criteria, such as area of application, target operating system, etc. Science building 4th floor rooms 410 and 418 please use your badge outside working hours 8. Typical examples are shadowvui, a visual user interface for the shadow raytracing code, and xaid, a package for xafs data analysis. The software is used worldwide by most synchrotron radiation facilities and has been crucial for beamline designers and users for the past 10 years.

The esrf is the worlds most intense xray source and a centre of excellence for fundamental and innovationdriven research in condensed and living matter science. Recover your login and reset your password i have lost my password and my email has changed. The itfa package contains an advanced pca method, which allows to derive the spectra of single species from mixtures. The wavelet package helps to separate backscattering atoms at similar distances and to identify their nature. From the user point of view, the shadow package can be divided into several parts. Helliwell, emeritus professor, university of manchester, was the aca patterson awardee in 2014.

As most python packages, pyfai is available via pip. Many software packages exist for analyzing small angle scattering data. The conuss software package provides evaluation methods for data obtained by nuclear resonant scattering techniques. The software is organized in modules covering all relevant steps in the data reduction from a stack of several hundred twodimensional ccd images to a single rixs spectrum. To meet the high demands of the experimental stations beamlines, advanced control techniques running on realtime systems are needed. In horizontal scattering geometry the diffractometer can be positioned in sixcircle mode or zaxis mode spec version sixc. Manuel sanchez del rio esrf to design oasys orange synchrotron suite, a completely new graphical environment for modeling beamlines and xray experiments.

Monochromatic xrd cakingazimuthal integration within pyxe relies on pyfai and fabio, which is a software package developed at the esrf, designed to reduce saxs, waxs and xrpd images recorded by area detectors to 1d plots or 2d patterns. It enables users to perform interactive visualization and computation on 3d data sets. The edfexplorer software can be used to create, view and edit the content of an esrf data file, and these files are stored in the edf format. External software packages called extensions, that are optionally installed.

Helliwell was a pioneer in using synchrotron radiation, and his book macromolecular crystallography with synchrotron radiation is an essential reference work for. The results were obtained by five dammin runs which were averaged using the damaver software atsas package 29. The software package pyfai has been designed to reduce saxs, waxs and xrpd images taken with those detectors into 1d curves azimuthal integration usable by other software for indepth analysis such as rietveld refinement, or 2d images a radial transformation named caking. If you are unable to open the file this way, it may be because you do not have the correct application associated with the extension to view or edit the esrf file. The esrf staff and visitors are free to contact us for any problem. The instrumentation services and development division isdd of the esrf develops various types of functionally complex scientific instrumentation such as high precision positioning systems and the corresponding control equipment and software. The workshop for jra2 of calipsoplus was held at the esrf on 23rd may and 24th may, 2018 as a noon to noon meeting. Software european synchrotron radiation facility esrf. They have been written in spec, a unixbased software package for instrument control and data acquisition, used in such facilities.

Rainer wilcke, and claudio ferrero of the scientific software group at esrf. Synaptic, aptitude, ubuntu software center, and basically all apt clients. Xray detector software for processing singlecrystal monochromatic diffraction data recorded by the rotation method. An xray wavefront propagation software package for. This report summarises the jra2 workshop held at the esrf in may 2018 and next steps. In this living history he summarizes his personal and professional life. The avizo interface is modelled on the visual programming. Radia is a fast multiplatform software dedicated to 3d magnetostatics computation. The evolution of the hardware platforms, the modernization of the software tools, the access to the codes by a large number of young people and the popularization of the open source software for scientific applications drove dr.

The graphical user interface and many modules of the code are written in the interactive data language idl, which. An ensemble of software dedicated to the effiicent computation and presentation of synchrotron radiation spectra, angular pattern, polarization and power density in the near and far field approximations. External software packages called extensions, that are optionally installed, easily expands the functionality of xop. Through its innovative engineering, pioneering scientific vision and a strong commitment from its 700 staff members, the esrf is recognised as. Oasys orange synchrotron suite advanced photon source. For processing monochromatic diffraction data including stills from randomly oriented singlecrystals. Software for diffraction spec is a unixbased software package for instrument control and data acquisition widely used for xray diffraction at synchrotrons around the world and in university, national and industrial laboratories. This implies that the user is allowed to run the xop software but not to separate, modify or transform in any way parts of the idl software included in xop. Through its innovative engineering, pioneering scientific vision and a strong commitment from its 700 staff members, the esrf is recognised as one of the top research facilities worldwide.

Stepping motors, encoders and detectors are driven or read out via a vme interface. Looking for online definition of esrf or what esrf stands for. The current version of xop runs on unix, linux, mac os x, and windows platforms. The interpretation of these data is of fundamental interest for the understanding of the phenomena in play.

The implemented software architecture allows to obtain not only an intuitive and. It has been developed to run on pcs with a 32bit microsoft windows operating system in particular nt, 2000. A genuine interest in scientific instrumentation software and related techniques will be an asset proficiency in english working language at the esrf we offer a comprehensive benefits package designed to support your quality of life and your installation in the grenoble area when relocation is. Materials science, quality assurance in industrial environments, electronics, digital rock analysis etc. Esrf postdoctoral fellows in the matter at extremes group.

Under unix, you may have to run the command via sudo to gain root access an perform a system wide installation. It is also of high importance for the description of the characteristics of. Partly financed by the european community in the frame of the seventh research framework programme fp7, in preparation of the esrf upgrade, several studies have been set up. An xray wavefront propagation software package for the idl computer language article in proceedings of spie the international society for optical engineering 5536 october 2004 with 151. It keeps track of metadata and supplies history information.

The macros have been used during the scientific experiments of the beamline in december 2017. The beamline is equipped with a hp 71580 workstation under unix and connected to the ethernet. For processing monochromatic diffraction data including stills from randomly oriented. Plain text content is usually stored in these edf files, though binary data can also be entered by the author of the edf document. Data analysis european synchrotron radiation facility esrf.

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